Gene sequences

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Trait-Related Loci

Nicotiana tabacum

CDS Sequence

CDS ID	lcl\|NW_015794943.1_cds_XP_016441625.1_3615
CDS Infomation	[gene=LOC107767217] [db_xref=GeneID:107767217] [protein=E3 ubiquitin-protein ligase UPL3] [protein_id=XP_016441625.1] [location=join(8..694,939..1049,1197..1313,1442..1612,1686..1847,5030..5278,5376..5497,5642..7061,9261..9356,9558..11099,11221..11445,11555..11659,11971..12051,12152..12220,12341..12469,12550..12672,12853..12918)] [gbkey=CDS]
Sequence	ATGGACTCCACAAACGAATCTTCCGGGTCGGGTACCCGAACCCGCCGTGGTAAGAATCCT AGTCATGGTTCCGATAAAGATAATAATAATTTGGATAAAGGTAAGGAGAAAGAGCATGAA GTTAGGGTTAGGGATAAGAATAGGGATAGGGATAGGGAGGCTGAGAGGAGTCTAGGATTG AACATAGATTCTGGTGGTGGTGAGGACGATGATAATGATAGCGAAGGGGGTGTTGGTATT TTGCACCAGAATTTAACTTCAGCAAGTAGTGCACTTCAAGGACTTCTTAGGAAACTAGGT GCTGGATTGGATGATTTACTCCCCAGCTCTGCAATGGGGTCTGCGTCGTCGTCCCATCAG AGTGGCCGGCTCAAGAAGATATTGTCCGGTTTGAGGGCGGATGGTGAGGAAGGGAAACAA GTAGAAGCTCTGACTCAGCTGTGTGAGATGCTTTCTATTGGAACGGAAGATTCACTAAGC ACATTTTCCGTGGACTCGTTCGTACCTGTGCTTGTTGGGCTGCTGAATCACGAGAGCAAT CCTGATATTATGCTTCTTGCAGCCCGGGCTCTTACCCACTTGGTTGATGTTCTACCTTCT TCTTGTGCTGCTGTTGTCCATTATGGAGCTGTTTCATGCTTTGTAGCTCGGCTGCTTACA ATTGAATACATGGACTTGGCTGAGCAGTCTTTGCAAGCTCTAAAGAAGATATCTCAGGAA CACCCAACTGCTTGCTTGAGGGCTGGTGCGCTGATGGCTGTGCTTTCTTATCTCGATTTC TTTTCCACTGGTGTTCAGAGAGTAGCATTAGCAACTGCTGCTAATATGTGCAAGAAGCTT CCCTCAGATGCTGCTGACTTTGTCATGGAAGCTGTACCGCTTTTGACAAATCTCCTTCAA TATCATGATGCAAAGGTATTAGAGCATGCTTCTATCTGCTTGACCCGTATTGCCGAATCA TTTGCATCATACCCAGAGAAGCTAGATGAACTTTGCAATCACGGACTTGTTACCCAAGCT GCCTCACTCATCTCAACCAGTAACTCTGGAGGTGGTCAGGCTTCACTCAGCACGTCAACC TACACAGGTTTAATCCGGCTTCTTGCGACATGTGCCAGTGGCTCTCCACTAGGAACTAAA ACTTTACTGCTGCTTGGTATCAGTGGAATTCTCAAGGATATTCTATCAGGTTCTGGTCTT GTGGCCTCTGTGTCTGTTTCAACTGCCTTGAGCAAACCTCCGGAGCAGATTTTTGAGATC GTGAACCTGGCAAATGAGCTTCTTCCTTCGCTGCCTCAAGGGACCATCTCTCTTCCAACC AGCACTAATTTGTTGATTAAAGGGTCTGTTGTGAAGAAACCTTCTGCTGGTGGTTCTACC AAACAGGAGGAGACGAATCTATCTACTCAGGAGGTTTCAGCTCGAGAAAAATTATTGAAT GATCAACCTGAACTTCTGCAACAATTTGGAATGGATCTGCTTCCTGTGCTGATCCAGGTA TATGGATCCAGTGTCAATAGTCCAGTTCGCCACAAGTGTCTCTCTGTTATTGGAAAACTT ATGTACTTCAGCAGTGCAGATATGATTCAATCTCTAAATAACATCACTAACATATCAAGT TTTTTGGCTGGAGTATTGGCCTGGAAGGATCCCCAAGTGCTGGTGCCTGCCCTTCAAGTA GCAGAAATTTTAATGGAAAAACTTCCTGGAATTTTTTCCAAGATGTTTGTGCGAGAAGGT GTTGTTCATGCTGTAGATGCTCTGATAGTGTCTGCGTCCCATAGTTCAGCTCCTTCCCAG CCATCATCTGCTGAGAAGGACAATGATTGTATACCTGGGTCATCTCGCTCTAGGCGTAAT CGACGTCGTGGCAATAATTCAAATGCAGATGCAAGTTCCATTGAGGATCCCAAGAGTACA GTTCCTGGGAGTGGATCACCGCCAAACTCATTGGAAATTCCAAAGACCAGTTCTAGCATT CGCATGGCAGTCAGTGCATGTGCTAAATCTTTCAAAGATAAATACTTCCCTTCAGATTCA GGGGCTTCTGAAGTTGGCGTTACTGATGATCTTCTACGATTGAAGAATCTCAGTATGAAG TTGAACGCTGGTGTTGATGAACAAATATCTAAATCTAAAGGAAAATCAAAAGCTTCTGCT CCTCGGCTTGGAGATATTTCTGCCAGTAAGGAAGAGACCTTGGCCGAACTGGTAGCTTCC ATGCTGGGGGAGCTCAGCAAAGGGGATGGTGTATCAACTTTCGAGTTCATTGGAAGTGGA GTTGTTGCATCTTTGCTGAACTATTTTACATGTGGATTTTTTTCCAAGGAAAGAATCTCA GATGCTAATTTGTCTAGGCTTCGACAACAAGCAATCAGAAGATATAAGTCTTTTATTGCA GTTGCCCTTCCTGCTACTGTTGATAGTGGAAATATTGTTCCTATGACTGTTTTGGTTCAA AAGCTTCAAAATGCCCTATCTTCGTTGGAGCGGTTCCCTGTCGTGCTGAGTCATTCTTCC AGATCATCTACCGGAAATGCGCGACTTTCTTCAGGTTTAAGTGCTTTGTCGCAACCATTC AAGCTACGCCTTTGCAGAGCTCAAGGGGACAAAACCCTCCGTGACTACTCCTCAAATGTT GTGTTGATTGATCCTTTAGCAAGTTTGGCGGCAATTGAAGACTTTCTTTGGCCTCGAGTT CAGCGAGTTGAGTCTGGACAAAAGGCCTTTGCGTCAGTAGGCAACTCTGAGTCTGGGACC ACCCCTGCAGGAGTTGGTGCTTCATGCCCATCTACTTCTACTCCGGCTTCTGGATCTCGG CGTACACGATCTAGGTCAGCGGTTAATATAAATGACGGTGCAAAGAAAGACCCGCCACAG GAAAAAAATGGAAGTTCTTCCAAGGGCAAAGGAAAGGCTGTTCTGAAACCGGCTCAAGAA GATGGCAGAGGGCCCCAGACAAGAAATGCTGCTCGAAGACGAGCAGCCTTGGATAAAGAA ACAGAGGTGAAACCCGTGACTGGGGATTCTAGTTCCGAGGATGAGGAGTTGGATATGTCA CCTGTTGAAATTGATGATGCTTTGGTCATTGAGGATGACGATATATCTGATGATGATGAA GATGACCATGATGATGTGTTGAGAGATGATTCTCTTCCTGTTTGCATGCCGGACAAAGTT CATGATGTTAAATTGGGTGATTCTTCGGAGGAGAATCCTGCCGCACAGACGGCAAATGAT AGCCAGACAAATGCTGGTGGTGGTTCTAGCAGCAGAGCTGCTTCTGCTCAGGGATCTGAA TCCGTTGAGTTCAGGAGTGGGAGTTCTTATGGTTCAAGGGGTGCAATGTCATTTGCTGCT GCTGCCATGGCCGGACTTGCATCTGCTAATGGTAGAGGTGTGAGAGGTGCTAGAGATCGC CATGGACGCCCTCTCTTTAGCACTAGTGATCCGCACAGACTTGTATTTTCTGCAGGTGGA AAGCAGCTTAATAGGCACTTGACTATCTACCAGGCTATCCAGCGGCAGCTTGTCCTTGAT GAGGATGATGAAGAGAGATATGGTGGCACTGACTTTGTATCTAGTGACGGAAGCAGACTT TGGGGTGATATTTACACTATCACATACCAAAGGGCTGACAGTCAAGCAGAGAGGTCTACC AAAGGTGATGGGAGCTCAACTTCCACCAAGTCTAACAAAGCTAGTTCTTCAGCAAGTGCC AGTGCTGATCCCTCATTGCATCGAGCATCATTGTTAGATAGTATATTACAGGGAGAACTT CCTTGTGATATGGAAAAAACCAATCCTACTTACAACATTTTGGCCCTGTTACGTGTACTG GATGGATTAAACCAGCTGGCCCCACGGTTACGGGTCCAGTCAGTTATTGATGATTTTTCT GAAGGGGAAAAGTTGAGTTTAGATGAGCTCAGTGCTGCTGGTGTCAAAATTCCTCCGGAG GAATTTGTCAACAGTAAGCTCACTCCAAAGTTGGCCCGACAGATTCAGGATGCTCTAGCC CTTTGTAGTGGGTCTCTTCCATCATGGTGTTATCAGTTGACAAGGTCCTGTCCATTTCTT TTTCCATTTGAGGTTCGACGCCAGTACTTCTATTCAACAGCCTTTGGATTATCTAGGGCT TTGTATCGGCTTCAGCAACAACAAGGTGCGGATGGTAATGGATCTACCAATGAGAGAGAA GTTAGGGTCGGGAGATTACAGCGCCAGAAAGTCCGTGTCTCTAGAAATCGCATTCTAGAT TCTGCTGCGAAAGTAATGGAGATGTACTCCAGCCAAAAAGCTGTTCTTGAGGTTGAATAT TTTGGTGAAGTTGGCACTGGTTTGGGTCCAACTCTGGAGTTCTATACCCTTTTAAGTCAT GATCTGCAAAAAGTTGGACTGGGAATGTGGAGGACGAGTTCCTCATCAAGTGAACATTCA GTGGAAGTGAGCGTGGGTGAAAAACTGAACAGGGAAGATAAAGAACTTGTCCAAGCACCT CTTGGATTATTCCCACGTCCCTGGCCATCGACTGTTGATACTGCTGATGGAAACCAATTC ACCAAAGTAATAGAATATTTCAGATTGCTTGGGCGTGTGATGGCCAAAGCACTTCAAGAT GGGCGGCTTTTGGACCTCCCTATGTCAACAACTTTCTATAAGCTTGTCCTTGGCCAAGAG CTTGATCTGTATGATATTCTCTCTTTTGATGCCGAGTTGGGAAAGACTTTGCAAGAGTTG CAAGCTCTTGTTAGTCGGAAACAATATATAGAATCAATGGGAGGCCTGGGCCAAGACAAA ATTAGTGATTTGCATTTTCGTGGGACTCCAGTTGAGGATCTTTGTTTAGATTTCACGCTC CCAGGCTATCCTGAATATGTTCTGAAAGCAGGCGATCAGAATGTGGATCTTAGTAACTTG GAGGAATATGTTTCTTTGGTGGTTGATGCCACTGTGAGGACTGGAATTGGGCGGCAGATG GAAGCATTTAGATCTGGCTTCAATCAGGTATTTGACATTTCAGCTCTGCAAACATTCTCT CCTTCTGAGTTGGACTACCTGCTTTGTGGCCGTAGAGAGTTATGGAAGGCTGAGACTCTT GTAGATCATATCAAATTTGATCATGGATATACAGCCAAGAGTCCCGCTATTGTTTATTTA CTAGAGATCATGGGAGAGTTCACTCCTGAGCAGCAACGAGCGTTCTGTCAGTTTGTCACT GGTGCTCCCCGGCTTCCTCCAGGTGGTCTGGCTGTGCTCAATCCTAAGTTGACAATAGTG AGGAAGCATTCATCTAGTGCTAGTAATACAGCATCAAATGGTAATATGCCATCAGAATCT GCAGATGATGACCTACCTAGTGTGATGACATGTGCTAACTACCTGAAACTGCCTCCCTAT TCTACTAAGGAAATCATGTACAAGAAGTTACTCTATGCGATCAATGAAGGCCAAGGATCC TTTGATTTATCATAA

Peptide Sequence

PEP ID	XP_016441625.1
PEP Infomation	PREDICTED: E3 ubiquitin-protein ligase UPL3 [Nicotiana tabacum]
Sequence	MDSTNESSGSGTRTRRGKNPSHGSDKDNNNLDKGKEKEHEVRVRDKNRDRDREAERSLGL NIDSGGGEDDDNDSEGGVGILHQNLTSASSALQGLLRKLGAGLDDLLPSSAMGSASSSHQ SGRLKKILSGLRADGEEGKQVEALTQLCEMLSIGTEDSLSTFSVDSFVPVLVGLLNHESN PDIMLLAARALTHLVDVLPSSCAAVVHYGAVSCFVARLLTIEYMDLAEQSLQALKKISQE HPTACLRAGALMAVLSYLDFFSTGVQRVALATAANMCKKLPSDAADFVMEAVPLLTNLLQ YHDAKVLEHASICLTRIAESFASYPEKLDELCNHGLVTQAASLISTSNSGGGQASLSTST YTGLIRLLATCASGSPLGTKTLLLLGISGILKDILSGSGLVASVSVSTALSKPPEQIFEI VNLANELLPSLPQGTISLPTSTNLLIKGSVVKKPSAGGSTKQEETNLSTQEVSAREKLLN DQPELLQQFGMDLLPVLIQVYGSSVNSPVRHKCLSVIGKLMYFSSADMIQSLNNITNISS FLAGVLAWKDPQVLVPALQVAEILMEKLPGIFSKMFVREGVVHAVDALIVSASHSSAPSQ PSSAEKDNDCIPGSSRSRRNRRRGNNSNADASSIEDPKSTVPGSGSPPNSLEIPKTSSSI RMAVSACAKSFKDKYFPSDSGASEVGVTDDLLRLKNLSMKLNAGVDEQISKSKGKSKASA PRLGDISASKEETLAELVASMLGELSKGDGVSTFEFIGSGVVASLLNYFTCGFFSKERIS DANLSRLRQQAIRRYKSFIAVALPATVDSGNIVPMTVLVQKLQNALSSLERFPVVLSHSS RSSTGNARLSSGLSALSQPFKLRLCRAQGDKTLRDYSSNVVLIDPLASLAAIEDFLWPRV QRVESGQKAFASVGNSESGTTPAGVGASCPSTSTPASGSRRTRSRSAVNINDGAKKDPPQ EKNGSSSKGKGKAVLKPAQEDGRGPQTRNAARRRAALDKETEVKPVTGDSSSEDEELDMS PVEIDDALVIEDDDISDDDEDDHDDVLRDDSLPVCMPDKVHDVKLGDSSEENPAAQTAND SQTNAGGGSSSRAASAQGSESVEFRSGSSYGSRGAMSFAAAAMAGLASANGRGVRGARDR HGRPLFSTSDPHRLVFSAGGKQLNRHLTIYQAIQRQLVLDEDDEERYGGTDFVSSDGSRL WGDIYTITYQRADSQAERSTKGDGSSTSTKSNKASSSASASADPSLHRASLLDSILQGEL PCDMEKTNPTYNILALLRVLDGLNQLAPRLRVQSVIDDFSEGEKLSLDELSAAGVKIPPE EFVNSKLTPKLARQIQDALALCSGSLPSWCYQLTRSCPFLFPFEVRRQYFYSTAFGLSRA LYRLQQQQGADGNGSTNEREVRVGRLQRQKVRVSRNRILDSAAKVMEMYSSQKAVLEVEY FGEVGTGLGPTLEFYTLLSHDLQKVGLGMWRTSSSSSEHSVEVSVGEKLNREDKELVQAP LGLFPRPWPSTVDTADGNQFTKVIEYFRLLGRVMAKALQDGRLLDLPMSTTFYKLVLGQE LDLYDILSFDAELGKTLQELQALVSRKQYIESMGGLGQDKISDLHFRGTPVEDLCLDFTL PGYPEYVLKAGDQNVDLSNLEEYVSLVVDATVRTGIGRQMEAFRSGFNQVFDISALQTFS PSELDYLLCGRRELWKAETLVDHIKFDHGYTAKSPAIVYLLEIMGEFTPEQQRAFCQFVT GAPRLPPGGLAVLNPKLTIVRKHSSSASNTASNGNMPSESADDDLPSVMTCANYLKLPPY STKEIMYKKLLYAINEGQGSFDLS

Transcript Sequence

Gene sequence data has not been registered.